071007-遗传学

植物干细胞与再生

2005-09--2008-11   法国斯特拉斯堡第一大学   博士学位
2002-09--2005-02   上海交通大学   硕士学位
1998-09--2002-06   上海交通大学   学士学位

   

2013-12~现在, 中国科学院上海生命科学研究院植物生理生态研究所, 研究员
2008-11~2013-11,中国科学院上海生命科学研究院植物生理生态研究所, 副研究员

《植物生理与分子生物学》 植物器官发生

   

[1] 翟宁, 潘轩, 曾民环, 徐麟. Developmental trajectory of pluripotent stem cell establishment in Arabidopsis callus guided by a quiescent center-related gene network. Development[J]. 2023, [2] Liu, Wu, Zhang, Yuyun, Fang, Xing, Tran, Sorrel, Zhai, Ning, Yang, Zhengfei, Guo, Fu, Chen, Lyuqin, Yu, Jie, Ison, Madalene S, Zhang, Teng, Sun, Lijun, Bian, Hongwu, Zhang, Yijing, Yang, Li, Xu, Lin. Transcriptional landscapes of de novo root regeneration from detached Arabidopsis leaves revealed by time-lapse and single-cell RNA sequencing analyses. PLANT COMMUNICATIONS[J]. 2022, 3(4): 83-104, http://dx.doi.org/10.1016/j.xplc.2022.100306.
[3] Yu, Jie, Zhang, Yuyun, Liu, Wu, Wang, Hua, Wen, Shaoting, Zhang, Yijing, Xu, Lin. Molecular Evolution of Auxin-Mediated Root Initiation in Plants. MOLECULAR BIOLOGY AND EVOLUTION[J]. 2020, 37(5): 1387-1393, http://dx.doi.org/10.1093/molbev/msz202.
[4] Jing Pan, Fei Zhao, Guifang Zhang, Yu Pan, Lijun Sun, Ning Bao, Peng Qin, Lyuqin Chen, Jie Yu, Yijing Zhang, Lin Xu. Control of de novo root regeneration efficiency by developmental status of Arabidopsis leaf explants. 遗传学报:英文版[J]. 2019, 46(3): 133-140, http://lib.cqvip.com/Qikan/Article/Detail?id=7001975539.
[5] Xu Lin. Jasmonate-mediated wound signaling promotes plant regeneration. Nature Plants. 2019, [6] Liu, Wu, Xu, Lin. Recruitment of IC-WOX Genes in Root Evolution. TRENDS IN PLANT SCIENCEnull. 2018, 23(6): 490-496, http://dx.doi.org/10.1016/j.tplants.2018.03.011.
[7] Xu, Lin. De novo root regeneration from leaf explants: wounding, auxin, and cell fate transition. CURRENT OPINION IN PLANT BIOLOGYnull. 2018, 41: 39-45, http://dx.doi.org/10.1016/j.pbi.2017.08.004.
[8] Xu Lin. Adventitious lateral rooting: the plasticity of root system architecture.. Physiol. Plant.. 2018, [9] Liu, Jie, Hu, Xiaomei, Qin, Peng, Prasad, Kalika, Hu, Yuxin, Xu, Lin. The WOX11-LBD16 Pathway Promotes Pluripotency Acquisition in Callus Cells During De Novo Shoot Regeneration in Tissue Culture. PLANT AND CELL PHYSIOLOGY[J]. 2018, 59(4): 739-748, https://www.webofscience.com/wos/woscc/full-record/WOS:000430163300009.
[10] Yu, Jie, Liu, Wu, Liu, Jie, Qin, Peng, Xu, Lin. Auxin Control of Root Organogenesis from Callus in Tissue Culture. FRONTIERS IN PLANT SCIENCE[J]. 2017, 8: https://doaj.org/article/0e344aee03b643b79ab25f81d13df117.
[11] Sheng, Lihong, Hu, Xiaomei, Du, Yujuan, Zhang, Guifang, Huang, Hai, Scheres, Ben, Xu, Lin. Non-canonical WOX11-mediated root branching contributes to plasticity in Arabidopsis root system architecture. DEVELOPMENT[J]. 2017, 144(17): 3126-3133, http://dx.doi.org/10.1242/dev.152132.
[12] Li, Dongjie, Liu, Jie, Liu, Wu, Li, Guang, Yang, Zhongnan, Qin, Peng, Xu, Lin. The ISWI remodeler in plants: protein complexes, biochemical functions, and developmental roles. CHROMOSOMAnull. 2017, 126(3): 365-373, http://dx.doi.org/10.1007/s00412-017-0626-9.
[13] Bo Hu, Guifang Zhang, Wu Liu, Jianmin Shi, Hua Wang, Meifang Qi, Jiqin Li, Peng Qin, Ying Ruan, Hai Huang, Yijing Zhang, Lin Xu. Divergent regeneration-competent cells adopt a common mechanism for callus initiation in angiosperms. REGENERATION[J]. 2017, 4(3): 132-139, [14] Zeng, Minhuan, Hu, Bo, Li, Jiqin, Zhang, Guifang, Ruan, Ying, Huang, Hai, Wang, Hua, Xu, Lin. Stem cell lineage in body layer specialization and vascular patterning of rice root and leaf. SCIENCE BULLETIN[J]. 2016, 61(11): 847-858, http://dx.doi.org/10.1007/s11434-015-0849-1.
[15] Chen, Lyuqin, Tong, Jianhua, Xiao, Langtao, Ruan, Ying, Liu, Jingchun, Zeng, Minhuan, Huang, Hai, Wang, JiaWei, Xu, Lin. YUCCA-mediated auxin biogenesis is required for cell fate transition occurring during de novo root organogenesis in Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY[J]. 2016, 67(14): 4273-4284, http://www.corc.org.cn/handle/1471x/2376333.
[16] Hu, Xiaomei, Xu, Lin. Transcription Factors WOX11/12 Directly Activate WOX5/7 to Promote Root Primordia Initiation and Organogenesis. PLANT PHYSIOLOGY[J]. 2016, 172(4): 2363-2373, http://dx.doi.org/10.1104/pp.16.01067.
[17] Beibei Sun, Lyuqin Chen, Jingchun Liu, Xuening Zhang, Zhongnan Yang, Wu Liu, Lin Xu. TAA family contributes to auxin production during de novo regeneration of adventitious roots from Arabidopsis leaf explants. 科学通报：英文版[J]. 2016, 1728-1731, http://lib.cqvip.com/Qikan/Article/Detail?id=74888487504849545050484854.
[18] Xu Lin. Arabidopsis flower and embryo development are repressed in seedlings by different combinations of Polycomb group proteins in association with distinct sets of cis-regulatory elements.. PLoS Genet.. 2016, [19] Ge, Yachao, Liu, Jie, Zeng, Minhuan, He, Jianfeng, Qin, Peng, Huang, Hai, Xu, Lin. Identification of WOX Family Genes in Selaginella kraussiana for Studies on Stem Cells and Regeneration in Lycophytes. FRONTIERS IN PLANT SCIENCE[J]. 2016, 7: https://doaj.org/article/c0f44a891b104b9ab0b9643566dc6cca.
[20] Chen, Xiaodong, Cheng, Jingfei, Chen, Lyuqin, Zhang, Guifang, Huang, Hai, Zhang, Yijing, Xu, Lin. Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis. PLANT PHYSIOLOGY[J]. 2016, 170(4): 2136-2145, https://www.webofscience.com/wos/woscc/full-record/WOS:000375424200019.
[21] Xu Lin. Meristem control of leaf patterning.(Research Highlight). Science China. Life sciences.. 2015, [22] Chen, Xiaodong, Qu, Yuliang, Sheng, Lihong, Liu, Jingchun, Huang, Hai, Xu, Lin. A simple method suitable to study de novo root organogenesis. FRONTIERS IN PLANT SCIENCE[J]. 2014, 5: https://doaj.org/article/115cce956c454e848f56e9d940ca6497.
[23] Li, Guang, Liu, Shujing, Wang, Jiawei, He, Jianfeng, Huang, Hai, Zhang, Yijing, Xu, Lin. ISWI proteins participate in the genome-wide nucleosome distribution in Arabidopsis. PLANT JOURNAL[J]. 2014, 78(4): 706-714, https://www.webofscience.com/wos/woscc/full-record/WOS:000335537600014.
[24] Xu Lin. WOX11 and 12 are involved the first-step cell fate transition during de novo root organogenesis in Arabidopsis.. Plant Cell. 2014, [25] Xu, Lin, Huang, Hai, Galliot, B. Genetic and Epigenetic Controls of Plant Regeneration. MECHANISM OF REGENERATIONnull. 2014, 108: 1-33, http://dx.doi.org/10.1016/B978-0-12-391498-9.00009-7.
[26] Chen, Xiaofan, Huang, Hai, Xu, Lin. The CaMV 35S enhancer has a function to change the histone modification state at insertion loci in Arabidopsis thaliana. JOURNAL OF PLANT RESEARCH[J]. 2013, 126(6): 841-846, https://www.webofscience.com/wos/woscc/full-record/WOS:000326288100009.
[27] He, Chongsheng, Huang, Hai, Xu, Lin. Mechanisms guiding Polycomb activities during gene silencing in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE[J]. 2013, 4: https://doaj.org/article/675851d1f1b246d099bf9e41ce1a8643.
[28] Chen, Xiaofan, Wang, Hua, Li, Jiqin, Huang, Hai, Xu, Lin. Quantitative control of ASYMMETRIC LEAVES2 expression is critical for leaf axial patterning in Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY[J]. 2013, 64(16): 4895-4905, https://www.webofscience.com/wos/woscc/full-record/WOS:000327510100006.
[29] Xu Lin. SLIDE, the protein interacting domain of ISWI remodelers, binds DDT-domain proteins of different subfamilies in chromatin remodeling complexes.. J. Integr. Plant Biol.. 2013, [30] He, Chongsheng, Chen, Xiaofan, Huang, Hai, Xu, Lin. Reprogramming of H3K27me3 Is Critical for Acquisition of Pluripotency from Cultured Arabidopsis Tissues. PLOS GENETICS[J]. 2012, 8(8): http://dx.doi.org/10.1371/journal.pgen.1002911.
[31] Li, Guang, Zhang, Jiawei, Li, Jiqin, Yang, Zhongnan, Huang, Hai, Xu, Lin. Imitation Switch chromatin remodeling factors and their interacting RINGLET proteins act together in controlling the plant vegetative phase in Arabidopsis. PLANT JOURNAL[J]. 2012, 72(2): 261-270, https://www.webofscience.com/wos/woscc/full-record/WOS:000309910300009.
[32] Xu Lin. In situ detection of mature miRNAs in plants using LNA-modified DNA probes.. Methods Mol. Biol.. 2012, [33] Li, Yang, Pi, Limin, Huang, Hai, Xu, Lin. ATH1 and KNAT2 proteins act together in regulation of plant inflorescence architecture. JOURNAL OF EXPERIMENTAL BOTANY[J]. 2012, 63(3): 1423-1433, https://www.webofscience.com/wos/woscc/full-record/WOS:000300238400030.
[34] Wang, Wei, Xu, Ben, Wang, Hua, Li, Jiqin, Huang, Hai, Xu, Lin. YUCCA Genes Are Expressed in Response to Leaf Adaxial-Abaxial Juxtaposition and Are Required for Leaf Margin Development. PLANT PHYSIOLOGY[J]. 2011, 157(4): 1805-1819, https://www.webofscience.com/wos/woscc/full-record/WOS:000298375600017.

   

（ 1 ） 植物器官从头再生的机理研究, 主持, 国家级, 2015-01--2017-12
（ 2 ） 植物再生过程中细胞重编程的表观遗传调控机制研究, 主持, 国家级, 2015-01--2016-12
（ 3 ） 叶片发育极性建成的调控网络研究, 参与, 国家级, 2014-01--2018-12
（ 4 ） 植物表观遗传机制与重要调控蛋白质的功能和结构研究, 参与, 国家级, 2012-01--2016-12
（ 5 ） 芽从头发生的表观遗传调控机制, 主持, 国家级, 2017-01--2021-12
（ 6 ） 植物细胞全能性的机制研究 (中国科学院前沿科学重点研究项目), 主持, 部委级, 2016-09--2020-12
（ 7 ） 植物可塑性发育的分子调控机制--子课题《根和芽从头再生的机制研究》, 参与, 部委级, 2018-06--2023-05

（1）Callus formation and de novo organogenesis: Totipotency and dedifferentiation?   徐麟   2015-08-02
（2）WOX11-mediated regeneration in angiosperm   徐麟   2015-06-08
（3）Genetic and Epigenetic Controls of Plant De Novo Regeneration of Roots   徐麟   2013-10-01
（4）A framework of de novo root organogenesis in Arabidopsis   徐麟   2013-06-01

已指导学生

葛亚超  博士研究生  071007-遗传学  

叶亚进  博士研究生  071007-遗传学  

刘杰  博士研究生  071007-遗传学  

现指导学生

潘靖  博士研究生  071007-遗传学  

方兴  博士研究生  071007-遗传学  

张贵芳  博士研究生  071007-遗传学  

翟宁  博士研究生  071007-遗传学  

张腾  硕士研究生  071007-遗传学  

潘轩  博士研究生  071007-遗传学  

万启慧  硕士研究生  071007-遗传学