基本信息
傅雄飞  男  博导  中国科学院深圳先进技术研究院
电子邮件: xf.fu@siat.ac.cn
通信地址: 深圳市南山区西丽深圳大学城学苑大道1068号
邮政编码:

研究领域

定量生物学

合成生物学

统计物理

招生信息

微生物

定量生物学

合成生物学

统计物理

招生方向
定量生物学
合成生物学
非平衡态统计

教育背景

2008-09--2012-11   香港大学   博士
2004-09--2008-06   浙江大学   学士

工作经历

2016-09-至今 中科院深圳先进技术研究院合成生物学研究所(筹) 研究员

2013-03--2016-09   耶鲁大学分子细胞发育生物学系   博士后

出版信息


发表论文
[1] Wei, Ting, Lai, Wangsheng, Chen, Qian, Zhang, Yi, Sun, Chenjian, He, Xionglei, Zhao, Guoping, Fu, Xiongfei, Liu, Chenli. Exploiting spatial dimensions to enable parallelized continuous directed evolution. MOLECULAR SYSTEMS BIOLOGY[J]. 2022, 18(9): http://dx.doi.org/10.15252/msb.202210934.
[2] Luo, Liang, Bai, Yang, Fu, Xiongfei. Stochastic threshold in cell size control. 2022, http://arxiv.org/abs/2203.02987.
[3] Chu, Yunmeng, Guo, Shun, Cui, Dachao, Fu, Xiongfei, Ma, Yingfei. DeephageTP: a convolutional neural network framework for identifying phage-specific proteins from metagenomic sequencing data. PEERJ[J]. 2022, 10: http://apps.webofknowledge.com/CitedFullRecord.do?product=UA&colName=WOS&SID=5CCFccWmJJRAuMzNPjj&search_mode=CitedFullRecord&isickref=WOS:000815068900006.
[4] 马文涛, 魏婷, 傅雄飞, 李雪飞. 肿瘤微环境中的定量工程生物学. 科学通报[J]. 2021, 66(3): 319-328, http://lib.cqvip.com/Qikan/Article/Detail?id=7104239790.
[5] 储攀, 朱静雯, 黄文琦, 刘陈立, 傅雄飞. 底盘-回路耦合:合成基因回路设计新挑战. 合成生物学[J]. 2021, 2(1): 91-105, https://kns.cnki.net/KCMS/detail/detail.aspx?dbcode=CJFQ&dbname=CJFDLAST2021&filename=HCSW202101006&v=MjkxMDI3WWViRzRITkRNcm85RllvUjhlWDFMdXhZUzdEaDFUM3FUcldNMUZyQ1VSN3VmWWVkbUZ5dm1VYnJJTFM=.
[6] Luo, Liang, Bai, Yang, Fu, Xiongfei. Master equation approach to the stochastic accumulation dynamics of bacterial cell cycle. NEW JOURNAL OF PHYSICS[J]. 2021, 23(8): [7] 苏颖彤, 白阳, 祁飞, 张易, 傅雄飞. 细菌种群迁移的时空动力学. 科学通报[J]. 2021, 66(3): 264-272, https://www.sciengine.com/doi/10.1360/TB-2020-0480.
[8] Bai, Yang, He, Caiyun, Chu, Pan, Long, Junjiajia, Li, Xuefei, Fu, Xiongfei. Spatial modulation of individual behaviors enables an ordered structure of diverse phenotypes during bacterial group migration. ELIFE[J]. 2021, 10: http://dx.doi.org/10.7554/eLife.67316.
[9] 傅雄飞, 黄雄亮, 夏霖. 细胞周期同步化方法在细菌细胞周期研究中的应用. 集成技术[J]. 2021, 10(5): 57-66, http://lib.cqvip.com/Qikan/Article/Detail?id=7105783746.
[10] Xiang, Yunqing, Wen, Hui, Yu, Yue, Li, Mingqiang, Fu, Xiongfei, Huang, Shuqiang. Gut-on-chip: Recreating human intestine in vitro. JOURNAL OF TISSUE ENGINEERING[J]. 2020, 11: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7682210/.
[11] Zheng, Hai, Bai, Yang, Jiang, Meiling, Tokuyasu, Taku A, Huang, Xiongliang, Zhong, Fajun, Wu, Yuqian, Fu, Xiongfei, Kleckner, Nancy, Hwa, Terence, Liu, Chenli. General quantitative relations linking cell growth and the cell cycle in Escherichia coli. NATURE MICROBIOLOGY[J]. 2020, 5(8): 995-+, https://www.webofscience.com/wos/woscc/full-record/WOS:000534311100002.
[12] Chen, Ling, Guan, Guoye, Liu, Quan, Yuan, Shengjian, Yan, Tingwei, Tian, Linyu, Zhou, Yan, Zhao, Yixuan, Ma, Yingfei, Wei, Ting, Fu, Xiongfei. Characterization and complete genomic analysis of two Salmonella phages, SenALZ1 and SenASZ3, new members of the genus Cba120virus. ARCHIVES OF VIROLOGY[J]. 2019, 164(5): 1475-1478, https://www.webofscience.com/wos/woscc/full-record/WOS:000464758100026.
[13] Nathan Hillson, Mark Caddick, Yizhi Cai, Jose A Carrasco, Matthew Wook Chang, Natalie C Curach, David J Bell, Rosalind Le Feuvre, Douglas C Friedman, Xiongfei Fu, Nicholas D Gold, Markus J Herrgrd, Maciej B Holowko, James R Johnson, Richard A Johnson, Jay D Keasling, Richard I Kitney, Akihiko Kondo, Chenli Liu, Vincent J J Martin, Filippo Menolascina, Chiaki Ogino, Nicola J Patron, Marilene Pavan, Chueh Loo Poh, Isak S Pretorius, Susan J Rosser, Nigel S Scrutton, Marko Storch, Hille Tekotte, Evelyn Travnik, Claudia E Vickers, Wen Shan Yew, Yingjin Yuan, Huimin Zhao, Paul S Freemont. Author Correction: Building a global alliance of biofoundries. NATURE COMMUNICATIONS[J]. 2019, 10(1): 1-2, http://dx.doi.org/10.1038/s41467-019-10862-1.
[14] Nathan Hillson, Mark Caddick, Yizhi Cai, Jose A Carrasco, Matthew Wook Chang, Natalie C Curach, David J Bell, Rosalind Le Feuvre, Douglas C Friedman, Xiongfei Fu, Nicholas D Gold, Markus J Herrgrd, Maciej B Holowko, James R Johnson, Richard A Johnson, Jay D Keasling, Richard I Kitney, Akihiko Kondo, Chenli Liu, Vincent J J Martin, Filippo Menolascina, Chiaki Ogino, Nicola J Patron, Marilene Pavan, Chueh Loo Poh, Isak S Pretorius, Susan J Rosser, Nigel S Scrutton, Marko Storch, Hille Tekotte, Evelyn Travnik, Claudia E Vickers, Wen Shan Yew, Yingjin Yuan, Huimin Zhao, Paul S Freemont. Building a global alliance of biofoundries. NATURE COMMUNICATIONS[J]. 2019, 10(1): 1-4, http://dx.doi.org/10.1038/s41467-019-10079-2.
[15] 崔金明, 张炳照, 马迎飞, 傅雄飞, 王猛, 刘陈立. 合成生物学研究的工程化平台. 中国科学院院刊[J]. 2018, 33(11): 1249-1257, http://ir.siat.ac.cn:8080/handle/172644/13458.
[16] Bai, Yang, Gao, Meng, Wen, Lingling, He, Caiyun, Chen, Yuan, Liu, Chenli, Fu, Xiongfei, Huang, Shuqiang. Applications of Microfluidics in Quantitative Biology. BIOTECHNOLOGY JOURNAL[J]. 2018, 13(5): http://dx.doi.org/10.1002/biot.201700170.
[17] X Fu, S Kato, J Long, H H Mattingly, C He, D C Vural, S W Zucker, T Emonet. Spatial self-organization resolves conflicts between individuality and collective migration. NATURE COMMUNICATIONS[J]. 2018, 9(1): http://ir.siat.ac.cn:8080/handle/172644/13426.
[18] Chenli Liu. Applications of Microfluidics in Quantitative Biology.. Biotechnology Journal.. 2017, [19] 刘立中, 白阳, 郑海, 傅雄飞, 刘陈立. 合成生物学在基础生命科学研究中的应用. 生物工程学报[J]. 2017, 33(3): 315-323, http://sciencechina.cn/gw.jsp?action=detail.jsp&internal_id=5948617&detailType=1.
[20] 汪晓雷, 刘陈立, 傅雄飞, 黄建东. 合成生物学:一种研究生物图案形成的新方法. 中国科学. 生命科学[J]. 2015, 45(10): 928-934, https://www.sciengine.com/doi/10.1360/N052015-00151.
[21] Dufour, Yann S, Fu, Xiongfei, HernandezNunez, Luis, Emonet, Thierry. Limits of Feedback Control in Bacterial Chemotaxis. PLOS COMPUTATIONAL BIOLOGY[J]. 2014, 10(6): https://doaj.org/article/80b62b5a842b429eaf076c49aba8eb66.
[22] Fu, Xiongfei, Tang, LeiHan, Liu, Chenli, Huang, JianDong, Hwa, Terence, Lenz, Peter. Stripe Formation in Bacterial Systems with Density-Suppressed Motility. PHYSICAL REVIEW LETTERS[J]. 2012, 108(19): https://www.webofscience.com/wos/woscc/full-record/WOS:000303761600024.
[23] Liu, Chenli, Fu, Xiongfei, Liu, Lizhong, Ren, Xiaojing, Chau, Carlos K L, Li, Sihong, Xiang, Lu, Zeng, Hualing, Chen, Guanhua, Tang, LeiHan, Lenz, Peter, Cui, Xiaodong, Huang, Wei, Hwa, Terence, Huang, JianDong. Sequential Establishment of Stripe Patterns in an Expanding Cell Population. SCIENCE[J]. 2011, 334(6053): 238-241, https://www.webofscience.com/wos/woscc/full-record/WOS:000295833600050.
[24] Synthetic biology: a new approach to study biological pattern formation. http://ir.siat.ac.cn:8080/handle/172644/5277.

科研活动

   
科研项目
( 1 ) 关于细菌生长速率与趋化运动能力间权衡机制的研究, 主持, 国家级, 2016-01--2019-12
( 2 ) 关于细菌逃避中性粒细胞追逐的最优策略研究, 主持, 国家级, 2016-01--2018-12
( 3 ) 耐药性致病细菌快速检测芯片研发, 参与, 省级, 2018-01--2019-12
( 4 ) 青年****配套, 主持, 部委级, 2017-12--2018-12
( 5 ) 人工改造噬菌体治疗超级耐药菌新技术的研发, 参与, 省级, 2015-11--2020-11
( 6 ) 耐药性致病细菌快速检测芯片研究, 参与, 省级, 2017-06--2020-06
( 7 ) 国防类项目, 参与, 国家级, 2017-06--2019-06
( 8 ) 高版本模式微生物底盘细胞, 主持, 国家级, 2019-07--2024-06

指导学生

现指导学生

储攀  硕士研究生  085238-生物工程  

苏颖彤  硕士研究生  085238-生物工程  

马智鑫  硕士研究生  085238-生物工程