基本信息
纪运恒  男  博导  中国科学院昆明植物研究所
电子邮件: jiyh@mail.kib.ac.cn
通信地址: 昆明市蓝黑路132号
邮政编码: 650201

研究领域

1)重要药用类群——重楼属的专著性研究

重楼属是一个具重要药用价值的植物类群,在我国有着悠久的药用历史,也是是 “云南白药”、“宫血宁”和“季德胜蛇药片”等著名商品药的主要原料。长期以来,重楼属的分类及系统发育一直存在诸多的问题和争论。针对这些问题和争论,采用分子系统学和系统发育基因组学等方面手段,对重楼属展开了全面的专著性研究。将重楼属划分为5个组,描述并发表了多个新分类群;发现种间杂交可能在重楼属的物种形成中发挥重要作用;提出了重楼属植物应在渐新世早期起源于东亚北纬35度附近地区,随着东亚季风气候的形成,逐步向南扩散并进入到中国的亚热带地区的假说。在此基础上综合形态学与分子证据,对重楼属植物进行了全面的分类修订。相关研究成果发表在Annals of Botany, BMC Plant Biology, Frontiers in Plant ScienceFitoterapiaPhytotaxa等期刊上。重楼属世界性专著“A Monograph of Paris (Melanthiaceae)”于2020年由国际知名学术出版机构Springer出版。


2)"3E"植物类群的进化与保育

       除了重楼属外,还对人参属Panax、三尖杉属Cephalotaxus、延龄草属Trillium、天门冬科Asparagaceae、水生被子植物等“3E”(economically important, endangered, endemic)植物类群开展了系统发育基因组学和比较基因组学研究,旨在对物种保护、资源开发、可持续利用提供理论依据。研究成果在Molecular Ecology Resources, Conservation Genetics Resources, Frontiers in Plant ScienceBMC Plant BiologyAnnals of Botany等期刊。

 

3)植物分类学

专长于黑药花科、天门冬科、人参属等类群及水生被子植物分类、鉴定,熟悉植物学拉丁文和国际植物命名法规。对云南高原湖泊及湿地水生植物进行过系统的调查与采集,参与了《云南湿地》专著中水生植物部分的编写。多次参加高黎贡山、横断山等地区及苍山、大山包等国家级自然保护区生物多样性调查工作,采集并鉴定了大量的植物标本,有丰富的野外工作和组织大规模植物资源考察的经验。

 

4)生物地理学

中国亚热带地区因保存了诸多的北极-第三纪孑遗成分(Arcto-Tertiary relicts,如珙桐、银杏、银杉等)而在植物区系特征上表现出显著的古特有性,这种古特有性何时开始形成?其发展与演化与东亚晚第三纪以来的气候变化(如晚第三纪全球变冷、东亚季风气候的形成、第四纪冰期)有何联系?这些问题迄今尚未得到圆满的解决。我们结合化石和分子证据,对水青树、珙桐等北极-第三纪孑遗植物的演化历史进行了分析,初步发现这些孑遗植物在第四纪冰期来临之前即已迁移到中国亚热带地区,表明该地区植物区系早在晚第三纪就形成了古特有性的雏形。阶段性成果发表在Journal of BiogeographyAmerican Journal of BotanyFrontiers in Plant Science等期刊上。


招生信息

招生专业
071001-植物学
招生方向
(1) 植物系统进化与植物地理学

(2) 植物分类学

(3)植物资源学



招生专业
071001-植物学
招生方向
植物系统学,植物分类学,进化生态学,保护遗传学,植物资源学

教育背景

2002-09--2006-08   中国科学院昆明植物研究所   理学博士
1997-09--2000-07   中国科学院昆明植物研究所   理学硕士
1991-09--1995-06   西南师范大学生物系   理学学士学位
学历


研究生

学位

博士

工作经历

19957—19979月:四川省会理县民族中学,中学二级教师

20008—今中国科学院昆明植物研究所,历任研究实习员、助理研究员、副研究员、研究员(2011年1月任研究组长)

2005年2月—2005年5月Department of Botany, Califonia Academy of Science, 访问学者

2011年8月—2013年2月Department of Ecology and Evulutionary Biology, University of Toronto, 访问学者



社会兼职
2022-03-31-今,国际期刊Frontiers in Genetics编委, Review Editor
2020-11-30-今,国际植物学期刊BMC Plant Biology编委, Associate Editor
2018-12-30-2023-12-31,九三学社中央委员会科普工作委员会, 委员

教授课程

生物地理学

专利与奖励

   

出版信息


发表论文
[1] LinBo Jia, GiSoo Nam, Tao Su, Xia Yang, ZheKun Zhou, YunHeng Ji. Miocene Dipteronia (Sapindaceae) samaras from South Korea and their biogeographical implications. ISCIENCE[J]. 2023, 26(4): 106515-, http://dx.doi.org/10.1016/j.isci.2023.106515.
[2] Ji, Yunheng, Landis, Jacob B, Yang, Jin, Wang, Shuying, Zhou, Nian, Luo, Yan, Liu, Haiyang. Phylogeny and evolution of Asparagaceae subfamily Nolinoideae: new insights from plastid phylogenomics. ANNALS OF BOTANY[J]. 2023, 131(2): 301-312, http://dx.doi.org/10.1093/aob/mcac144.
[3] Shuying Wang, Nian Zhou, Naixing Shi, Guangfei Zhang, Haiyang Liu, Xiaorong Guo, Yunheng Ji. Testing and using complete plastomes for authentication of medicinal Polygonatum species (Asparagaceae). INDUSTRIAL CROPS & PRODUCTS. 2023, 197: http://dx.doi.org/10.1016/j.indcrop.2023.116557.
[4] Ji, Yunheng, Yang, Jin, Landis, Jacob B, Wang, Shuying, Jin, Lei, Xie, Pingxuan, Liu, Haiyang, Yang, JunBo, Yi, TingShuang. Genome Skimming Contributes to Clarifying Species Limits in Paris Section Axiparis (Melanthiaceae). FRONTIERS IN PLANT SCIENCE[J]. 2022, 13: http://dx.doi.org/10.3389/fpls.2022.832034.
[5] 黄永江, 苏涛, 朱海, 贾林波, 胡瑾瑾, 纪运恒, 周浙昆. 横断山南段上新世的植被多样性与分布格局 / Vegetation diversity and distribution in the Pliocene of the southern Hengduan Mountains region. 生物多样性[J]. 2022, 31(11): 1-14, [6] Yu, LingLing, Li, YanXi, Gao, WenTao, Ling, ShanShan, Ni, Wei, Ji, YunHeng, Liu, HaiYang. Steroidal saponins with cytotoxic activity from the stems and leaves of Paris fargesii. NEW JOURNAL OF CHEMISTRY[J]. 2022, 46(40): 19136-19146, http://dx.doi.org/10.1039/d2nj03666e.
[7] Guo, Xiaorong, Shi, Naixing, Xie, Pingxuan, Zhang, Guangfei, Liu, Haiyang, Ji, Yunheng. Plastome sequencing for accurate and effective authentication of Polygonatum kingianum (Asparagaceae). INDUSTRIAL CROPS AND PRODUCTS[J]. 2022, 184: http://dx.doi.org/10.1016/j.indcrop.2022.115056.
[8] Ji, Yunheng, Liu, Changkun, Landis, Jacob B, Deng, Min, Chen, Jiahui. Plastome phylogenomics of Cephalotaxus (Cephalotaxaceae) and allied genera. ANNALS OF BOTANY[J]. 2021, 127(5): 697-708, http://dx.doi.org/10.1093/aob/mcaa201.
[9] Ji, Yunheng, Yang, Jin, Landis, Jacob B, Wang, Shuying, Yang, Zhenyan, Zhang, Yonghong. Deciphering the Taxonomic Delimitation of Ottelia acuminata (Hydrocharitaceae) Using Complete Plastomes as Super-Barcodes. FRONTIERS IN PLANT SCIENCE[J]. 2021, 12: http://dx.doi.org/10.3389/fpls.2021.681270.
[10] Liu, Changkun, Yang, Jin, Jin, Lei, Wang, Shuying, Yang, Zhenyan, Ji, Yunheng. Plastome phylogenomics of the East Asian endemic genus Dobinea. PLANT DIVERSITY[J]. 2021, 43(1): 35-42, https://doaj.org/article/ca886d22600b4bc399847e14714b6f1e.
[11] Guo, Xiaorong, Zhang, Guangfei, Fan, Linyuan, Liu, Changkun, Ji, Yunheng. Highly degenerate plastomes in two hemiparasitic dwarf mistletoes: Arceuthobium chinense and A. pini (Viscaceae). PLANTA[J]. 2021, 253(6): http://dx.doi.org/10.1007/s00425-021-03643-y.
[12] Guo, Xiaorong, Liu, Changkun, Wang, Hengchang, Zhang, Guangfei, Yan, Hanjing, Jin, Lei, Su, Wenhua, Ji, Yunheng. The complete plastomes of two flowering epiparasites (Phacellaria glomerata and P. compressa): Gene content, organization, and plastome degradation. GENOMICS[J]. 2021, 113(2): 447-455, http://dx.doi.org/10.1016/j.ygeno.2020.12.031.
[13] Ji, Yunheng, Liu, Changkun, Yang, Jin, Jin, Lei, Yang, Zhenyan, Yang, JunBo. Ultra-Barcoding Discovers a Cryptic Species in Paris yunnanensis (Melanthiaceae), a Medicinally Important Plant. FRONTIERS IN PLANT SCIENCE[J]. 2020, 11: https://doaj.org/article/0ad3ffad4ba34d6984316d78c3dd19cc.
[14] Xiao, Siyue, Ji, Yunheng, Liu, Jian, Gong, Xun. Genetic characterization of the entire range of Cycas panzhihuaensis (Cycadaceae). PLANT DIVERSITY[J]. 2020, 42(1): 7-18, http://lib.cqvip.com/Qikan/Article/Detail?id=7101199665.
[15] Wang, Jie, Li, Dan, Ni, Wei, Qin, XuJie, Liu, Hui, Yu, LingLing, Qiao, Xue, Ji, YunHeng, He, Li, Nian, SiHui, Liu, HaiYang. Molecular networking uncovers steroidal saponins of Paris tengchongensis. FITOTERAPIA[J]. 2020, 145: http://ir.kib.ac.cn/handle/151853/72217, http://www.irgrid.ac.cn/handle/1471x/6927953, http://ir.kib.ac.cn/handle/151853/72218, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000540710700007&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=3a85505900f77cc629623c3f2907beab.
[16] Guo, Xiaorong, Liu, Changkun, Zhang, Guangfei, Su, Wenhua, Landis, Jacob B, Zhang, Xu, Wang, Hengchang, Ji, Yunheng. The Complete Plastomes of Five Hemiparasitic Plants (Osyris wightiana,Pyrularia edulis,Santalum album,Viscum liquidambaricolum, andV. ovalifolium): Comparative and Evolutionary Analyses Within Santalales. FRONTIERS IN GENETICS[J]. 2020, 11: http://ir.kib.ac.cn/handle/151853/71979, http://www.irgrid.ac.cn/handle/1471x/6927901, http://ir.kib.ac.cn/handle/151853/71980, http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000546134300001&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=3a85505900f77cc629623c3f2907beab.
[17] Ji, Yunheng, Yang, Lifang, Chase, Mark W, Liu, Changkun, Yang, Zhenyan, Yang, Jin, Yang, JunBo, Yi, TingShuang. Plastome phylogenomics, biogeography, and clade diversification of Paris (Melanthiaceae). BMC PLANT BIOLOGY[J]. 2019, 19(1): http://dx.doi.org/10.1186/s12870-019-2147-6.
[18] Chen, Jiahui, Huang, Yuan, Brachi, Benjamin, Yun, Quanzheng, Zhang, Wei, Lu, Wei, Li, Hongna, Li, Wenqing, Sun, Xudong, Wang, Guangyan, He, Jun, Zhou, Zhuo, Chen, Kaiyun, Ji, Yunheng, Shi, Mingming, Sun, Wenguang, Yang, Yongping, Zhang, Rengang, Abbott, Richard J, Sun, Hang. Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot. NATURE COMMUNICATIONS[J]. 2019, 10(1): https://doaj.org/article/19cbaebff8104d8e85542250d6796eff.
[19] Yang, Lifang, Yang, Zhenyan, Liu, Changkun, He, Zhengshan, Zhang, Zhirong, Yang, Jing, Liu, Haiyang, Yang, Junbo, Ji, Yunheng. Chloroplast phylogenomic analysis provides insights into the evolution of the largest eukaryotic genome holder, Paris japonica (Melanthiaceae). BMC PLANT BIOLOGY[J]. 2019, 19(1): http://dx.doi.org/10.1186/s12870-019-1879-7.
[20] Zhang, Xu, Deng, Tao, Moore, Michael J, Ji, Yunheng, Lin, Nan, Zhang, Huajie, Meng, Aiping, Wang, Hengchang, Sun, Yanxia, Sun, Hang. Plastome phylogenomics of Saussurea (Asteraceae: Cardueae). BMC PLANT BIOLOGY[J]. 2019, 19(1): http://dx.doi.org/10.1186/s12870-019-1896-6.
[21] Yang, Zhenyan, Yang, Chengjin, Ji, Yunheng. Paris variabilis (Melanthiaceae), a new species from southwestern China. PHYTOTAXA[J]. 2019, 401(3): 190-198, http://dx.doi.org/10.11646/phytotaxa.401.3.4.
[22] Ji, Yunheng, Liu, Changkun, Yang, Zhenyan, Yang, Lifang, He, Zhengshan, Wang, Hengchang, Yang, Junbo, Yi, Tingshuang. Testing and using complete plastomes and ribosomal DNA sequences as the next generation DNA barcodes in Panax (Araliaceae). MOLECULAR ECOLOGY RESOURCES[J]. 2019, 19(5): 1333-1345, http://dx.doi.org/10.1111/1755-0998.13050.
[23] Liu, Changkun, Li, Lili, Jin, Lei, Yang, Zhenyan, Ji, Yunheng. Characterization of the whole plastome of Dipentodon Sinicus (Dipentodontaceae). MITOCHONDRIAL DNA PART B-RESOURCES[J]. 2019, 4(2): 3149-3150, http://dx.doi.org/10.1080/23802359.2019.1667914.
[24] Liu, Changkun, Yang, Lifang, Yang, Zhenyan, Ji, Yunheng. Complete chloroplast genome of the economically important crop, Amorphophallus konjac (Araceae). MITOCHONDRIAL DNA PART B-RESOURCES[J]. 2019, 4(1): 1097-1098, http://ir.kib.ac.cn/handle/151853/65149.
[25] Yang, Zhenyan, Yang, Lifang, Liu, Changkun, Qin, Xujie, Liu, Haiyang, Chen, Jiahui, Ji, Yunheng. Transcriptome analyses of Paris polyphylla var. chinensis, Ypsilandra thibetica, and Polygonatum kingianum characterize their steroidal saponin biosynthesis pathway. FITOTERAPIA[J]. 2019, 135: 52-63, http://dx.doi.org/10.1016/j.fitote.2019.04.008.
[26] Liu, Changkun, Yang, Lifang, Yang, Zhenyan, Ji, Yunheng. Complete plastome of Toricellia tiliifolia (Toricelliaceae), a relict plant. MITOCHONDRIAL DNA PART B-RESOURCES[J]. 2019, 4(1): 1535-1536, http://www.irgrid.ac.cn/handle/1471x/2483608.
[27] Liu, Changkun, Yang, Zhenyan, Yang, Lifang, Yang, Junbo, Ji, Yunheng. The complete plastome of Panax stipuleanatus: Comparative and phylogenetic analyses of the genus Panax (Araliaceae). PLANTDIVERSITY[J]. 2018, 40(6): 265-276, http://lib.cqvip.com/Qikan/Article/Detail?id=6100116154.
[28] 纪运恒. he Complete Chloroplast Genome of Panax stipuleanutus: Comparative and Phylogenetic Analyses of the Genus Panax (Araliaceae). Plant Diversity. 2018, [29] Shi, Youcai, Yang, Lifang, Yang, Zhenyan, Ji, Yunheng. The complete chloroplast genome of Pleione bulbocodioides (Orchidaceae). CONSERVATION GENETICS RESOURCES[J]. 2018, 10(1): 21-25, https://www.webofscience.com/wos/woscc/full-record/WOS:000426818400006.
[30] 纪运恒. A new species of Paris, section Axiparis (Melanthiaceae) from Yunnan, China. Phytotaxa. 2017, [31] Qin, XuJie, Si, YongAi, Chen, Yu, Liu, Hui, Ni, Wei, Yan, Huan, Shu, Tong, Ji, YunHeng, Liu, HaiYang. Cytotoxic steroidal saponins from Trillium kamtschaticum. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS[J]. 2017, 27(11): 2267-2273, http://dx.doi.org/10.1016/j.bmcl.2017.04.057.
[32] Lu, TingXiang, Shu, Tong, Qin, XuJie, Ni, Wei, Ji, YunHeng, Chen, QiRun, Khan, Afsar, Zhao, Qing, Liu, HaiYang. Spirostanol saponins from Ypsilandra parviflora induce platelet aggregation. STEROIDS[J]. 2017, 123: 55-60, http://dx.doi.org/10.1016/j.steroids.2017.05.004.
[33] Yang, Zhenyan, Ji, Yunheng. Comparative and Phylogenetic Analyses of the Complete Chloroplast Genomes of Three Arcto-Tertiary Relicts: Camptotheca acuminata, Davidia involucrata, and Nyssa sinensis. FRONTIERS IN PLANT SCIENCE[J]. 2017, 8: https://doaj.org/article/d07fb28022b6439286d1b907d386fc6c.
[34] Qin XuJie, Si YongAi, Chen Yu, Liu Hui, Ni Wei, Yan Huan, Shu Tong, Ji YunHeng, Liu HaiYang. Cytotoxic steroidal saponins from Trillium kamtschaticum. BIOORGANIC & MEDICINAL CHEMISTRY LETTERS[J]. 2017, [35] Ji, Yunheng, Yang, Chengjin, Huang, Yuling. A new species of Paris sect. Axiparis (Melanthiaceae) from Yunnan, China. PHYTOTAXA. 2017, 306(3): 234-236, http://ir.kib.ac.cn/handle/151853/51352.
[36] Huang, Yuling, Li, Xiaojuan, Yang, Zhenyan, Yang, Chengjin, Yang, Junbo, Ji, Yunheng. Analysis of Complete Chloroplast Genome Sequences Improves Phylogenetic Resolution in Paris (Melanthiaceae ). FRONTIERS IN PLANT SCIENCE[J]. 2016, 7(1): https://doaj.org/article/2573025e36c7425baf23f457242a4778.
[37] 纪运恒. Complete chloroplast genome of the medicinal plant Paris polyphylla var. chinensis (Melanthiaceae). Journal of Tropical and Subtropical Botany. 2015, [38] Sun, Yanxia, Moore, Michael J, Yue, Liangliang, Feng, Tao, Chu, Haijia, Chen, Shaotian, Ji, Yunheng, Wang, Hengchang, Li, Jianqiang. Chloroplast phylogeography of the East Asian Arcto-Tertiary relict Tetracentron sinense (Trochodendraceae). JOURNAL OF BIOGEOGRAPHY[J]. 2014, 41(9): 1721-1732, http://dx.doi.org/10.1111/jbi.12323.
[39] 纪运恒. Microsatellite primer development for Ottelia accuminata (Hydrocharitaceae), a submerged macrophyte endemic to southwestern China. Guihaia. 2014, [40] 纪运恒. Chloroplast phylogeography of the East Asian Arcto-Tertiarny relic Tetracentron sinensis (Trochodendraceae). JORNALOFBIOGEOGRAPHY. 2014, [41] 纪运恒. Molecular authentication of the medicinal plant Paris polyphylla Smith var. yunnanensis (Melanthiaceae) and its related species by polymerase chain reaction–. Journal of Medicinal Plants Research. 2012, [42] Tao, Chengcheng, Yang, Zhenyan, Lu, Ranran, Liu, Tao, Chen, Shaotian, Ji, Yunheng. MICROSATELLITE MARKERS FOR THE RELICTUAL DOVE TREE, DAVIDIA INVOLUCRATA (CORNACEAE). AMERICAN JOURNAL OF BOTANY[J]. 2012, 99(3): E108-E110, http://www.irgrid.ac.cn/handle/1471x/431666.
[43] Yang, Zhengyan, Lu, Ranran, Tao, Chengcheng, Chen, Shaotian, Ji, Yunheng. MICROSATELLITES FOR TETRACENTRON SINENSE (TROCHODENDRACEAE), A TERTIARY RELICT ENDEMIC TO EAST ASIA. AMERICAN JOURNAL OF BOTANY[J]. 2012, 99(8): E320-E322, http://dx.doi.org/10.3732/ajb.1200012.
[44] Yang, Ying, Zhai, Yanhong, Liu, Tao, Zhang, Fangming, Ji, Yunheng. Detection of Valeriana jatamansi as an Adulterant of Medicinal Paris by Length Variation of Chloroplast psbA-trnH Region. PLANTA MEDICA[J]. 2011, 77(1): 87-91, http://dx.doi.org/10.1055/s-0030-1250072.
[45] Dao, Zhiling, Ji, Yunheng, Liu, Tao, Liu, Keming, Li, Heng. DEVELOPMENT OF TEN POLYMORPHIC MICROSATELLITE LOCI FOR FOSBERGIA SHWELIENSIS (RUBIACEAE), A POTENTIALLY CRISIS ENDANGERED TREE. AMERICAN JOURNAL OF BOTANY[J]. 2011, 98(6): E161-E163, https://www.webofscience.com/wos/woscc/full-record/WOS:000291395600010.
[46] Chen, Shaotian, Wu, Xiayu, Ji, Yunheng, Yang, Junbo. Isolation and Characterization of Microsatellite Loci in Pistacia weinmannifolia (Anacardiaceae). INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES[J]. 2011, 12(11): 7818-7823, https://doaj.org/article/f4b52693a8434b518d1f99b0423a5b2b.
[47] 翟艳红, 杨莹, 星耀武, 纪运恒, 周浙昆. 云贵高原多星韭二倍体—四倍体分布格局研究. 植物科学学报[J]. 2011, 29(1): 50-57, http://lib.cqvip.com/Qikan/Article/Detail?id=37587836.
[48] 纪运恒. Development of seven novel EST-SSR makers from Cycas panzhihuaensis (Cycadaceae). American Journal of Botany. 2010, [49] 纪运恒. PsbA-trnH sequence analysis from chloroplast on medicinal plants of Artemisia (Asteraceae). Chinese Agricultural Science Bulletin. 2009, [50] 纪运恒. 高黎贡山东西坡种子植物区系的比较研究. 云南植物研究. 2008, [51] 李嵘, 纪运恒, 刀志灵, 李恒. 高黎贡山北段东西坡种子植物区系的比较研究. 云南植物研究[J]. 2008, 30(2): 129-138, http://lib.cqvip.com/Qikan/Article/Detail?id=27035924.
[52] Ji YunHeng, Zhou ZheKun, Li Heng. Four new synonyms in the genus Paris (Trilliaceae). ACTA PHYTOTAXONOMICA SINICA[J]. 2007, 45(3): 388-390, http://www.irgrid.ac.cn/handle/1471x/501431.
[53] 李嵘, 刀志灵, 纪运恒, 李恒. 高黎贡山北段种子植物区系研究. 云南植物研究[J]. 2007, 29(6): 601-615, http://lib.cqvip.com/Qikan/Article/Detail?id=26234547.
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发表著作
(1) A Monograph of Paris (Melanthiaceae), Springer, 2020-11, 第 1 作者