071004-水生生物学

基因组学，生物信息学
环境微生物学
生态学

1998-09--北京大学   理学博士学位
1994-09--北京大学   理学学士学位

   

2016-02~现在, 中科院水生所, 研究员
2008-08~2016-02,中科院水生所, 副研究员
2005-07~现在, 美国宾州州立大学, 博士后
2003-11~现在, 美国宾州州立大学, 助研

   

[1] Lu, Yuntao, Li, Qi, Li, Tao. PPA-GCN: A Efficient GCN Framework for Prokaryotic Pathways Assignment. FRONTIERS IN GENETICS[J]. 2022, 13: http://dx.doi.org/10.3389/fgene.2022.839453.
[2] Wu, Zhigang, Wang, Zhong, Xie, Dong, Zhang, Juan, Cai, Pengsen, Li, Xing, Xu, Xinwei, Li, Tao, Zhao, Jindong. Extensive Sympatry and Frequent Hybridization of Ecologically Divergent Aquatic Plants on the Qinghai-Tibetan Plateau. FRONTIERS IN PLANT SCIENCE[J]. 2022, 13: http://dx.doi.org/10.3389/fpls.2022.851151.
[3] Wu, Zhigang, Wang, Zhong, Xie, Dong, Wang, Huijun, Zhao, Aiwen, Wang, Yalin, Wang, Hanling, Xu, Xinwei, Li, Tao, Zhao, Jindong. Effects of highland environments on clonal diversity in aquatic plants: An interspecific comparison study on the Qinghai-Tibetan Plateau. FRONTIERS IN PLANT SCIENCE[J]. 2022, 13: http://dx.doi.org/10.3389/fpls.2022.1040282.
[4] Wang, Bing, Wang, Min, Jia, Shuzhao, Li, Tao, Yang, Mingkun, Ge, Feng. Systematic Survey of the Regulatory Networks of the Long Noncoding RNA BANCR in Cervical Cancer Cells. JOURNAL OF PROTEOME RESEARCH[J]. 2022, 21(4): 1137-1152, http://dx.doi.org/10.1021/acs.jproteome.2c00009.
[5] Chen, Zhen, Shang, JinLong, Hou, Shengwei, Li, Tao, Li, Qi, Yang, YiWen, Hess, Wolfgang R, Qiu, BaoSheng. Genomic and transcriptomic insights into the habitat adaptation of the diazotrophic paddy-field cyanobacterium Nostoc sphaeroides. ENVIRONMENTAL MICROBIOLOGY[J]. 2021, 23(10): 5802-5822, http://dx.doi.org/10.1111/1462-2920.15521.
[6] Yang, Ruigang, Zhu, Lingyun, Li, Tao, Zhu, Lvyun, Ye, Zi, Zhang, Dongyi. Photosynthetic Conversion of CO2 Into Pinene Using Engineered Synechococcus sp. PCC 7002. FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY[J]. 2021, 9: http://dx.doi.org/10.3389/fbioe.2021.779437.
[7] Wu, Zhigang, Li, Xing, Xie, Dong, Wang, Huijun, Zhang, Zhiqi, Xu, Xinwei, Li, Tao. Spatial genetic structuring in a widespread wetland plant on a plateau: Effects of elevation-driven geographic isolation and environmental heterogeneity. FRESHWATER BIOLOGY[J]. 2020, 65(9): 1596-1607, http://dx.doi.org/10.1111/fwb.13525.
[8] 李涛. Trophic Status is Associated with Community Structure and Metabolic Potential of Planktonic Microbiota in Plateau Lake. frontiers in microbiology. 2019, [9] Shang, JinLong, Chen, Min, Hou, Shengwei, Li, Tao, Yang, YiWen, Li, Qi, Jiang, HaiBo, Dai, GuoZheng, Zhang, ZhongChun, Hess, Wolfgang R, Qiu, BaoSheng. Genomic and transcriptomic insights into the survival of the subaerial cyanobacterium Nostoc flagelliforme in arid and exposed habitats. ENVIRONMENTAL MICROBIOLOGY[J]. 2019, 21(2): 845-863, http://dx.doi.org/10.1111/1462-2920.14521.
[10] Wang, Juanping, Bai, Peng, Li, Qi, Lin, Yan, Huo, Da, Ke, Fei, Zhang, Qiya, Li, Tao, Zhao, Jindong. Interaction between cyanophage MaMV-DC and eight Microcystis strains, revealed by genetic defense systems. HARMFUL ALGAE[J]. 2019, 85(1): http://dx.doi.org/10.1016/j.hal.2019.101699.
[11] Shen, Mengyuan, Li, Qi, Ren, Minglei, Lin, Yan, Wang, Juanping, Chen, Li, Li, Tao, Zhao, Jindong. Trophic Status Is Associated With Community Structure and Metabolic Potential of Planktonic Microbiota in Plateau Lakes. FRONTIERSINMICROBIOLOGY[J]. 2019, 10(1): https://doaj.org/article/89e20b950b174490946bfbac80c1dbd1.
[12] Wang, Juanping, Wang, Chang, Li, Qi, Shen, Mengyuan, Bai, Peng, Li, Jionghui, Lin, Yan, Gan, Nanqin, Li, Tao, Zhao, Jindong. Microcystin-LR Degradation and Gene Regulation of Microcystin-Degrading Novosphingobium sp. THN1 at Different Carbon Concentrations. FRONTIERS IN MICROBIOLOGY[J]. 2019, 10(1): https://doaj.org/article/b0659fb1c36a4fbeb81e972239d88c0b.
[13] Qi Li, Feibi Lin, Chen Yang, Juanping Wang, Yan Lin, Mengyuan Shen, Min S Park, Tao Li, Jindong Zhao. A Large-Scale Comparative Metagenomic Study Reveals the Functional Interactions in Six Bloom-Forming Microcystis-Epibiont Communities. FRONTIERS IN MICROBIOLOGY[J]. 2018, 9: https://doaj.org/article/d181e8a377454dd8ab5ffcd71fe3d00f.
[14] Wang, Juanping, Wang, Chang, Li, Jionghui, Bai, Peng, Li, Qi, Shen, Mengyuan, Li, Renhui, Li, Tao, Zhao, Jindong. Comparative Genomics of Degradative Novosphingobium Strains With Special Reference to Microcystin-Degrading Novosphingobium sp THN1. FRONTIERS IN MICROBIOLOGY[J]. 2018, 9(1): http://202.127.146.157/handle/2RYDP1HH/5719.
[15] Minglei Ren, Guiying Zhang, Zi Ye, Zhixian Qiao, Meili Xie, Yan Lin, Tao Li, Jindong Zhao. Metagenomic analysis reveals potential interactions in an artificial coculture. 2017, [16] Xie, Meili, Ren, Minglei, Yang, Chen, Yi, Haisi, Li, Zhe, Li, Tao, Zhao, Jindong. Metagenomic Analysis Reveals Symbiotic Relationship among Bacteria in Microcystis-Dominated Community. FRONTIERS IN MICROBIOLOGY[J]. 2016, 7: https://doaj.org/article/04379c97453949bbb634b9f1b0010ce5.
[17] 赵进东. High-yield production of extracellular type-I cellulose by the cyanobacteriumSynechococcus sp PCC 7002. CELL DISCOVERY 2015 DOI:101038/CELLDISC. 2015, [18] Yang, Chen, Lin, Feibi, Li, Qi, Li, Tao, Zhao, Jindong. Comparative genomics reveals diversified CRISPR-Cas systems of globally distributed Microcystis aeruginosa, a freshwater bloom-forming cyanobacterium. FRONTIERS IN MICROBIOLOGY[J]. 2015, 6: http://www.irgrid.ac.cn/handle/1471x/978673.
[19] Zhao Jindong. Integrated Transcriptomic and Proteomic Analysis of the Global Response of Synechococcus sp. PCC 7002 to High Light Stress.. MCP. 2015, [20] Yang, Yaohua, Feng, Jie, Li, Tao, Ge, Feng, Zhao, Jindong. CyanOmics: an integrated database of omics for the model cyanobacterium Synechococcus sp PCC 7002. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION[J]. 2015, http://www.irgrid.ac.cn/handle/1471x/978698.
[21] Yang, Mingkun, Yang, Yaohua, Chen, Zhuo, Zhang, Jia, Lin, Yan, Wang, Yan, Xiong, Qian, Li, Tao, Ge, Feng, Bryant, Donald A, Zhao, Jindong. Proteogenomic analysis and global discovery of posttranslational modifications in prokaryotes. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA[J]. 2014, 111(52): E5633-E5642, http://dx.doi.org/10.1073/pnas.1412722111.
[22] Yang, Mingkun, Qiao, Zhixian, Zhang, Wanyi, Xiong, Qian, Zhang, Jia, Li, Tao, Ge, Feng, Zhao, Jindong. Global Phosphoproteomic Analysis Reveals Diverse Functions of Serine/Threonine/Tyrosine Phosphorylation in the Model Cyanobacterium Synechococcus sp Strain PCC 7002. JOURNAL OF PROTEOME RESEARCH[J]. 2013, 12(4): 1909-1923, http://dx.doi.org/10.1021/pr4000043.
[23] Lu, Pingli, Han, Xinwei, Qi, Ji, Yang, Jiange, Wijeratne, Asela J, Li, Tao, Ma, Hong. Analysis of Arabidopsis genome-wide variations before and after meiosis and meiotic recombination by resequencing Landsberg erecta and all four products of a single meiosis. GENOME RESEARCH[J]. 2012, 22(3): 508-518, http://dx.doi.org/10.1101/gr.127522.111.
[24] Han, Xinwei, Wu, Xia, Chung, WenYu, Li, Tao, Nekrutenko, Anton, Altman, Naomi S, Chen, Gong, Ma, Hong. Transcriptome of embryonic and neonatal mouse cortex by high-throughput RNA sequencing. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA[J]. 2009, 106(31): 12741-12746, http://ir.ihb.ac.cn/handle/152342/7626.

   

（ 1 ） 水华蓝藻基因组与元基因组数据库, 主持, 国家级, 2009-01--2011-12
（ 2 ） 水华蓝藻遗传特征分析, 主持, 国家级, 2009-01--2012-08
（ 3 ） 蓝藻Synechococcus sp. PCC7002 适应强光环境机理的研究, 主持, 国家级, 2011-01--2013-12
（ 4 ） 重点流域水华藻类生物入侵种的调查与研究, 主持, 国家级, 2016-01--2018-12
（ 5 ） 湖泊微生物宏基因组分析与基因资源库建设, 主持, 国家级, 2017-02--2022-01