Molecular ecology of marine microorganisms

From November 2006 to October 2008, postdoctoral fellow, Department of biology, University of Quebec, Montreal, Canada

   

2014-04~now, researcher, Institute of deep sea science and engineering, Chinese Academy of Sciences

2013-03-2014-03, associate researcher, Institute of deep sea science and engineering, Chinese Academy of Sciences

2012-02-2013-01, senior visiting scholar, School of civil and environmental engineering, National University of Singapore

2010-06-2010-08, visiting scientist, Woods Hole Institute of marine biology, USA

2008-11-2012-01, visiting scholar, Hong Kong University of science and technology

   

（1） Evolution and genetic adaptation of fishes to the deep sea, CELL, 2025, 第 14 作者

（2） Deep-Sea Ecosystems as an Unexpected Source of Antibiotic Resistance Genes, MARINE DRUGS, 2025, 第 5 作者  通讯作者

（3） The Vertical Metabolic Activity and Community Structure of Prokaryotes along Different Water Depths in the Kermadec and Diamantina Trenches, MICROORGANISMS, 2024, 第 2 作者  通讯作者

（4） Deterministic process controlling the prokaryotic community assembly across seamounts along in the Yap and Mariana trenches, ECOLOGICAL INDICATORS, 2024, 第 2 作者  通讯作者

（5） Evolutionary ecology of denitrifying methanotrophic NC10 bacteria in the deep-sea biosphere, Molecular Ecology, 2024, 第 3 作者  通讯作者

（6） 海洋暗光层颗粒附着微生物的群落演替和生态功能, Community succession and ecological functions of particle attached microbes in the twilight zone of the ocean, 河南师范大学学报（自然科学版）, 2024, 第 1 作者

（7） Metagenome sequencing and 107 microbial genomes from seamount sediments along the Yap and Mariana trenches, SCIENTIFIC DATA, 2024, 第 2 作者  通讯作者

（8） Chromatic Acclimating Synechococcus Dominate in Mesoscale Eddies, JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS, 2024, 第 6 作者

（9） Microbial communities reveal niche partitioning across the slope and bottom zones of the challenger deep, ENVIRONMENTAL MICROBIOLOGY REPORTS, 2024, 第 6 作者  通讯作者

（10） Comparative assessment of nitrogen fixation rate by ^(15)N_(2) tracer assays in the South China Sea, Comparative assessment of nitrogen fixation rate by ^(15)N_(2) tracer assays in the South China Sea, 海洋学报:英文版, 2023, 第 6 作者

（11） Genomic Insights into Niche Partitioning across Sediment Depth among Anaerobic Methane-Oxidizing Archaea in Global Methane Seeps, MSYSTEMS, 2023, 第 6 作者

（12） 大洋表层沉积物中甲烷代谢古菌群落的组成及分布特征, Composition and distribution of methane metabolic archaea in oceanic surface sediments, 海洋学报, 2023, 第 4 作者

（13） 夏季珠江口冲淡水对氨氧化古菌的空间演替及分布规律的影响, Community structures and activities of ammonia oxidizing archaea influenced by runoff input of Pearl River Estuary during summer, 河南师范大学学报:自然科学版, 2023, 第 1 作者

（14） Archaea predominate in the ammonia oxidation process in the sediments of the Yap and Mariana Trenches, FRONTIERS IN MICROBIOLOGY, 2023, 第 2 作者  通讯作者

（15） Active pathways of anaerobic methane oxidization in deep-sea cold seeps of the South China Sea, MICROBIOLOGY SPECTRUM, 2023, 第 2 作者  通讯作者

（16） Microbial Communities Are Shaped by Different Ecological Processes in Subtropical Reservoirs of Different Trophic States, MICROBIAL ECOLOGY, 2023, 第 6 作者  通讯作者

（17） Geographical distribution and driving force of micro-eukaryotes in the seamount sediments along the island arc of the Yap and Mariana trenches, MICROBIOLOGY SPECTRUM, 2023, 第 5 作者  通讯作者

（18） Global patterns and rates of habitat transitions across the eukaryotic tree of life, NATURE ECOLOGY & EVOLUTION, 2022, 第 5 作者

（19） Distribution and Oxidation Rates of Ammonia-Oxidizing Archaea Influenced by the Coastal Upwelling off Eastern Hainan Island, MICROORGANISMS, 2022, 第 6 作者  通讯作者

（20） Picocyanobacterial synechococcus in marine ecosystem: Insights from genetic diversity, global distribution, and potential function, MARINE ENVIRONMENTAL RESEARCH, 2022, 第 3 作者

（21） Composition and Ecological Roles of the Core Microbiome along the Abyssal-Hadal Transition Zone Sediments of the Mariana Trench, MICROBIOLOGY SPECTRUM, 2022, 第 1 作者  通讯作者

（22） Metabolic activity and community structure of prokaryotes associated with particles in the twilight zone of the South China Sea, FRONTIERS IN MICROBIOLOGY, 2022, 第 4 作者  通讯作者

（23） Insights into carbon-fixation pathways through metagonomics in the sediments of deep-sea cold seeps, MARINE POLLUTION BULLETIN, 2022, 第 2 作者  通讯作者

（24） Biogeography and Population Divergence of Microeukaryotes Associated with Fluids and Chimneys in the Hydrothermal Vents of the Southwest Indian Ocean, MICROBIOLOGY SPECTRUM, 2022, 第 3 作者  通讯作者

（25） Biogeographic distributions of microbial communities associated with anaerobic methane oxidation in the surface sediments of deep-sea cold seeps in the South China Sea, FRONTIERS IN MICROBIOLOGY, 2022, 第 2 作者  通讯作者

（26） Spatio-Temporal Variation of Synechococcus Assemblages at DNA and cDNA Levels in the Tropical Estuarine and Coastal Waters, FRONTIERS IN MICROBIOLOGY, 2022, 第 5 作者  通讯作者

（27） Spatial variation and metabolic diversity of microbial communities in the surface sediments of the Mariana Trench, FRONTIERS IN MICROBIOLOGY, 2022, 第 3 作者  通讯作者

（28） Global patterns and rates of habitat transitions across the eukaryotic tree of life, NATURE ECOLOGY & EVOLUTION, 2022, 第 5 作者

（29） Novel Viral Communities Potentially Assisting in Carbon, Nitrogen, and Sulfur Metabolism in the Upper Slope Sediments of Mariana Trench, MSYSTEMS, 2022, 第 2 作者  通讯作者

（30） Distinct metabolic strategies of the dominant heterotrophic bacterial groups associated with marine Synechococcus, SCIENCE OF THE TOTAL ENVIRONMENT, 2021, 第 6 作者

（31） Effect of river plume on phytoplankton community structure in Zhujiang River estuary, Effect of river plume on phytoplankton community structure in Zhujiang River estuary, JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2021, 第 8 作者

（32） Microbial Eukaryotes Associated With Sediments in Deep-Sea Cold Seeps, FRONTIERS IN MICROBIOLOGY, 2021, 第 5 作者  通讯作者

（33） Genomic and transcriptomic evidence for the diverse adaptations of subclusters 5.2 and 5.3 Synechococcus to mesoscale eddies, New Phytologist, 2021, 第 1 作者

（34） Geology, environment, and life in the deepest part of the world’s oceans, Geology, environment, and life in the deepest part of the world’s oceans, 创新(英文), 2021, 第 11 作者

（35） Diversity and distribution of viruses inhabiting the deepest ocean on Earth, ISME JOURNAL, 2021, 第 9 作者

（36） Geology, environment and life of the deepest part of the world’s ocean, The Innovation, 2021, 第 3 作者

（37） Anaerobic methane oxidation coupled to denitrification is an important potential methane sink in deep-sea cold seeps, SCIENCE OF THE TOTAL ENVIRONMENT, 2020, 第 1 作者  通讯作者

（38） Vertical shifts of particle-attached and free-living prokaryotes in the water column above the cold seeps of the South China Sea, MARINE POLLUTION BULLETIN, 2020, 第 2 作者  通讯作者

（39） Corrigendum to "Vertical shifts of particle-attached and free-living prokaryotes in the water column above the cold seeps of the South China Sea" Mar. Pollut. Bull. Volume 156, July 2020, 111,230, MARINE POLLUTION BULLETIN, 2020, 第 2 作者  通讯作者

（40） Vertical shifts of particle-attached and free-living prokaryotes in the water column above the cold seeps of the South China Sea (vol 156, 111230, 2020), MARINE POLLUTION BULLETIN, 2020, 第 2 作者  通讯作者

（41） Heterotrophic diazotrophs in a eutrophic temperate bay (Jiaozhou Bay) broadens the domain of N2 fixation in China's coastal waters, ESTUARINE COASTAL AND SHELF SCIENCE, 2020, 第 2 作者

（42） Metabolic response of prokaryotic microbes to sporadic hypoxia in a eutrophic subtropical estuary, MARINE POLLUTION BULLETIN, 2020, 第 2 作者

（43） Differential Distribution and Determinants of Ammonia Oxidizing Archaea Sublineages in the Oxygen Minimum Zone off Costa Rica, MICROORGANISMS, 2019, 第 4 作者

（44） Comparative metagenomics study reveals pollution induced changes of microbial genes in mangrove sediments, SCIENTIFIC REPORTS, 2019, 第 5 作者  通讯作者

（45） Spatial Variability of Picoeukaryotic Communities in the Mariana Trench, SCIENTIFIC REPORTS, 2018, 第 1 作者  通讯作者

（46） 三亚海域浮游病毒与细菌丰度的时空变化规律以及相关环境因子*, Spatiotemporal variations of virioplankton and bacterioplankton abundance in Sanya waters and their related environmental factors, 热带海洋学报, 2018, 第 1 作者

（47） Metagenomic Insights Into the Microbial Community and Nutrient Cycling in the Western Subarctic Pacific Ocean, FRONTIERS IN MICROBIOLOGY, 2018, 第 2 作者

（48） 亚热带和热带环境下夜光藻的摄食压力, Grazing pressure of Noctiluca in subtropical and tropical seas, 应用海洋学学报, 2018, 第 2 作者

（49） Particle-Attached and Free-Living Archaeal Communities in the Benthic Boundary Layer of the Mariana Trench, FRONTIERS IN MICROBIOLOGY, 2018, 第 1 作者  通讯作者

（50） Geographic Distribution of Ammonia-Oxidizing Archaea along the Kuril Islands in the Western Subarctic Pacific, FRONTIERS IN MICROBIOLOGY, 2017, 第 1 作者  通讯作者

（51） Spatial Variations of the Methanogenic Communities in the Sediments of Tropical Mangroves, PLOS ONE, 2016, 第 1 作者

（52） Effects of hypoxia on the phylogenetic composition and species distribution of protists in a subtropical harbor, MICROBIAL ECOLOGY, 2016, 第 2 作者

（53） Effects of intermediate metabolite carboxylic acids of TCA cycle on Microcystis with overproduction of phycocyanin, ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH, 2015, 第 8 作者

（54） Anthropogenic impact on diazotrophic diversity in the mangrove rhizosphere revealed by nifH pyrosequencing, FRONTIERS IN MICROBIOLOGY, 2015, 第 1 作者  通讯作者

（55） Co-occurrence of phycocyanin- and phycoerythrin-rich synechococcus in subtropical estuarine and coastal waters of hong kong, ENVIRONMENTAL MICROBIOLOGY REPORTS, 2014, 第 2 作者

（56） Vertical Profiles of Bacteria in the Tropical and Subarctic Oceans Revealed by Pyrosequencing, PLOS ONE, 2013, 第 1 作者

（57） Diversity and Spatial Distribution of Hydrazine Oxidoreductase ( hzo ) Gene in the Oxygen Minimum Zone Off Costa Rica, PLOS ONE, 2013, 第 2 作者